Software

Open-source tools I build and maintain. Below you can read the documentation, browse the source, or use the app directly in your browser.

Both packages can be installed from my R-universe repository, and the hosted Shiny apps live on Posit Connect Cloud.

radiatR

Analysis and visualisation of circular-arena tracking data. An R package providing a complete pipeline for analysing animal orientation and movement in circular arenas — reading data from 20+ tracking tools (EthoVision, DeepLabCut, SLEAP, TRex, ANY-maze, TrackMate, idtracker.ai, and others), deriving per-trial heading directions, and producing circular-statistics summaries and figures.

📖 Documentation · 💻 Source on GitHub · 🚀 Open the app in a new tab · ☁️ Hosted on Posit Connect Cloud

The interactive app below runs entirely in your browser (no install required) and may take a few seconds to start.

If the app doesn’t load, open it in a new tab.

luxR

Underwater light analysis and visual ecology. An R package for quantifying and modelling underwater light environments: it propagates spectral irradiance through the water column via wavelength-resolved Beer–Lambert attenuation, converts between energy and photon-flux units, and estimates photoreceptor excitation and visual contrast. A bundled Jerlov table covers eight optical water types from 350–700 nm.

📖 Documentation · 💻 Source on GitHub · 🚀 Open the app in a new tab

The interactive app below also runs entirely in your browser and may take a few seconds to start.

If the app doesn’t load, open it in a new tab.